Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVKDTNNFPYNGVVSFKD--------ATGFVIGKNTIITNKHVSKDYKVGD--RITAHP---NGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDA--KVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ |
| 2O8L Chain:A ((10-211)) | -----------------------------------------QITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVV-DATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNK-----HIGEVVKPATMSNNAETQTNQNITVTGYP-GDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGG---VPNEFNGAVFINENVRNFLKQNIE- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2O8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -60363 for 1651 contacts (-36.6/contact) +
2D Compatibility (PS) -20461 + (NN) -9051 + (LL) 4248
1D Compatibility (HY) -11600 + (ID) 3300
Total energy: -100527.0 ( -60.89 by residue)
QMean score : 0.414
|
|
|