Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIGEFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGFADRHAYEDFKQSDAFNDHFSKDALSHYFGSSGQHSSYFERYLYPIKE
3FJ2 Chain:A ((20-159))
MKKVFITTGTEHYLRQLMENYIGENVTLLQNFSQSLLYQESTGEKLFQEGKEYRVLQSSGSLKGFGIVVFEYIQLRDEEIPIFLQMYQHASLHFSETPGLQSTKLTKAMNTNQFLIVSFWDSEVFFQEWKKTPLHKEITS---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FJ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48800 for 982 contacts (-49.7/contact) +
2D Compatibility (PS) -15178 + (NN) -6572 + (LL) 1276
1D Compatibility (HY) -6800 + (ID) 1150
Total energy: -77224.0 ( -78.64 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_3FJ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FJ2-query.scw
PDB file :
Tito_Scwrl_3FJ2.pdb
: