Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPTFSSIIFLFFKLKYYAIVTILVTMIIMYLSNFATVGLFLTLRKYTTDPAILLPLYILSFSSVSLLATYLVRISLKKFKKSYLSLNKTYMIIISFVLFATFAFFYIYSTNTSSNGDSLIPYALVFIGLIIFISVVILIMSLFTLKEMKYKRNQEEIETYYEYTLKIEAINNEMRKFRHDYVNILTTLSEYIREDDMIGLRAYFNKNIVPMKDNLQMNAIKLNGIENLKVREIKGLITAKILRAQEMNIPISIEIPDEVSSIN---LNMIDLSRSIGIILDNAIE-ASTEIDDPIIRVAFIESENSVTFIVMNKCADDIPRIHELFQESFSTKGEGRGLGLSTLKEIADNADNVLLDTIIENGFFIQKVEIINN- |
1L0O Chain:A ((1-141)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRNEMHLQFSARSENESFARVTVAAFVAQLDPTMDELTEIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTVRDE-GVGIPDIEEARQPLFTTKPELERSGMG-FTIMENFMDEVIVESEVNKGTTVYLKKHIVKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59891 for 1019 contacts (-58.8/contact) +
2D Compatibility (PS) -14504 + (NN) 1103 + (LL) 22100
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -57142.0 ( -56.08 by residue)
QMean score : 0.492
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