Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIPTFSSIIFLFFKLKYYAIVTILVTMIIMYLSNFATVGLFLTLRKYTTDPAILLPLYILSFSSVSLLATYLVRISLKKFKKSYLSLNKTYMIIISFVLFATFAFFYIYSTNTSSNGDSLIPYALVFIGLIIFISVVILIMSLFTLKEMKYKRNQEEIETYYEYTLKIEAINNEMRKFRHDYVNILTTLSEYIREDDMIGLRAYFNKNIVPMKDNLQMNAIKLNGIENLKVREIKGLITAKILRAQEMNIPISIEIPDEVSSIN---LNMIDLSRSIGIILDNAIE-ASTEIDDPIIRVAFIESENSVTFIVMNKCADDIPRIHELFQESFSTKGEGRGLGLSTLKEIADNADNVLLDTIIENGFFIQKVEIINN-
1L0O Chain:A ((1-141))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRNEMHLQFSARSENESFARVTVAAFVAQLDPTMDELTEIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTVRDE-GVGIPDIEEARQPLFTTKPELERSGMG-FTIMENFMDEVIVESEVNKGTTVYLKKHIVKS


General information:
TITO was launched using:
RESULT:

Template: 1L0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59891 for 1019 contacts (-58.8/contact) +
2D Compatibility (PS) -14504 + (NN) 1103 + (LL) 22100
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -57142.0 ( -56.08 by residue)
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_1L0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L0O-query.scw
PDB file : Tito_Scwrl_1L0O.pdb: