Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTVYYDQDVKTDALQG-KKIAVVGYGSQGHAHAQNLKDN----GYDVV--IGIRPG-RSFDKAKEDGFD-----VFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNALAFAHGF---NIHFGVIQPPADVDVFLVAPKGPGHLVRRTFVEG-----SAVPSLFGIQQDASGQARNIALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGYQPELAYFEVLHEMKLIVDLMYEGGMENVRYSISNTAEFGDYVSGPRVITPDVKENMKAVLTDIQNGNFSNRFIEDNKNGFKEFYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK |
| 3FR8 Chain:A ((49-278)) | ------------EAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYE-KIFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPF--TFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAY-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91502 for 1594 contacts (-57.4/contact) +
2D Compatibility (PS) -22619 + (NN) -5534 + (LL) 8268
1D Compatibility (HY) -18800 + (ID) 3900
Total energy: -134087.0 ( -84.12 by residue)
QMean score : 0.388
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