Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRPEKIQNVVKLLSSLGVNIKKTKSRLDIINTLPASNKVSHELK
1D3C Chain:A ((114-133))
--TIADFQNLIAAAHAKNIKVI-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1D3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3902 for 78 contacts (-50.0/contact) +
2D Compatibility (PS) -2002 + (NN) 23 + (LL) 1692
1D Compatibility (HY) -800 + (ID) 100
Total energy: -5089.0 ( -65.24 by residue)
QMean score : 0.900
(partial model without unconserved sides chains):
PDB file :
Tito_1D3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D3C-query.scw
PDB file :
Tito_Scwrl_1D3C.pdb
: