Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGGQEDDVVAD--GIIYADPKECQELVEKTGIDALAPALGSVHGPYKGE--PKLGFKEMEEIGLSTGLPLVLHGGTGIPT---------------------KDIQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIKEFGTSNRAK |
| 2FJK Chain:A ((2-305)) | --LVTGLEILRKARAEGYGVGAFNTNNMEFTQAILEAAEEMKSPVILALSEGAMKY--GGRALTRMVVALAQEARV--PVAVHLDHGSSYESVLKALREGFTSVMIDKSHEDFETNVRETKRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHPRLARIAKLVPAPLVLHGASAVPQELVERFRAAGGEIGEASGIHPEDIKKAISLGIAKINTDTDLRLAFTALVRETLGKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSVGRA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87737 for 2471 contacts (-35.5/contact) +
2D Compatibility (PS) -30819 + (NN) -14162 + (LL) 568
1D Compatibility (HY) -19200 + (ID) 6950
Total energy: -158300.0 ( -64.06 by residue)
QMean score : 0.554
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