Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNKQILFNKIPEGMPQEDTFKIEEIDTPKLESDGVLVQTLYISVDPYMR---GRMTKADSYVQPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINHVQAD------QITKVPTTDVPLDLYLSVLGMPGQTAYHGLLDIGQPKAGDTVVVSAASGAVGSVVGQIAKIKGCRVVGIAGGDKKVNYLTETLGFDAGIDYKK-EDFAEALAQAVPDGIDVYFENVGGTVGDEVFKHLNRFARVPVCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVSEF-ANAFKEASEQLATWVQEGKIQSQVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE |
| 2Y05 Chain:A ((14-327)) | -------------GYPTNSDFELKTSELPPLKNGEVLLEALFLTVDPYMRVAAKRLKEGDT----------MMGQQVAKVVESKNVALPKGTIVLASPGW--TTHSISDGKDLEKLLTEWPDT-IPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYL-QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -153938 for 2475 contacts (-62.2/contact) +
2D Compatibility (PS) -32670 + (NN) -11851 + (LL) 2180
1D Compatibility (HY) -30000 + (ID) 6700
Total energy: -232979.0 ( -94.13 by residue)
QMean score : 0.518
|
|
|