Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKIENEIVNKTYLAINSLEELRNMIGIKSDYFYKCLYVNDHFYNVIKIPKRKKDEYRELMIPNMALKNIQRWILDNVLYRRQVHKCATGFVPRKSIVNNAIPHVGQKYILKMDIENFFPSITFKQVRKIFSEMGYKFELATALANLCTVNNQLPQGAPTSPYIANIIFYNIDKRIFSYCQKNNLRYTRYADDITISGSNKVSFSKEIIREIVNQYNFRINESKTIMFKPGDRKKVTGIIVNEKISVPKTLIREVRKQIYFVNKFGLEEHLIRNNYSLDYEQQFIMSIYGKISFIKMIDFKKGVSLQKKFNEVLGNIESSNMYRDNIDFDDIELHWIN |
| 3RL4 Chain:A ((110-160)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YEYKIVIAGNHELTFDKEFMADLV------FPSVSKL--KPEDFDNVQSLLTN------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5338 for 206 contacts (-25.9/contact) +
2D Compatibility (PS) -4586 + (NN) -365 + (LL) 22588
1D Compatibility (HY) -5200 + (ID) 650
Total energy: 6449.0 ( 31.31 by residue)
QMean score : 0.390
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