Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIKYILVVFVLSLTVLSGCSLPGLGSKSTKNDVKITALSTSESQIISHMLRLLIEHDTHGKIKPTLVNNLGSSTIQHNALINGDANISGVRYNGTDLTGALKEAP--IKDPKKAMIATQQGFKKKFDQTFFDSYGFANTYAFMVTKETAKKYHLETVSDLAKHSKDLRLGMDSSWMNRKGDGYEGFKKEYGFDFGTVRPMQIGLVYDALNTEKLDVALGYSTDGRIAAYDLKVLKDDKQFFPPYAASAVATNELLRQHPELKTTINKLTGKISTSEMQRLNYEADGKGKEPAVVAEEFLKKHHYFDKQKGGHK |
| 1SW1 Chain:A ((6-271)) | -------------------------------ER-VVIGSKPFNEQYILANMIAILLEENGY---KAEVKEGLGGTLVNYEALKRNDIQLY-VEYTGTAYNVILRKQPPELWDQQYIFDEVKKGLLEADGVVVAAKLGFRDDYALAVRADWAEENGVEKISDLAEFADQLVFGSDPEFASRP-DGLPQIKKVYGFEFKEVKQMEPTLMYEAIKNKQVDVIPAYTTDSRVDLFNLKILEDDKGALPPYDAIIIVNGNTAKDE-KLISVLKLLEDRIDTDTMRALNYQYDVEKKDAREIAMSFLKEQ----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60917 for 2236 contacts (-27.2/contact) +
2D Compatibility (PS) -28338 + (NN) -5788 + (LL) 2024
1D Compatibility (HY) -19600 + (ID) 3950
Total energy: -116569.0 ( -52.13 by residue)
QMean score : 0.426
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