Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFYEFMQSFLGDDTPLGELVDWINQDSNFPREVKSHSEILSYFRTNPCPESISVPVIKRALSVFNQFTNVQ
2KVS Chain:A ((6-72))
MTFYNFIMGFQNDNTPFGILAEHVSEDKAFPRLEERHQVIRAYVMSN-YTDHQLIETTNRAISLYMAN----
General information:
TITO was launched using:
RESULT:
Template:
2KVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41350 for 406 contacts (-101.8/contact) +
2D Compatibility (PS) -6749 + (NN) -783 + (LL) 144
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -53388.0 ( -131.50 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_2KVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KVS-query.scw
PDB file :
Tito_Scwrl_2KVS.pdb
: