Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRTMMNAKIHRARVTESNLNYVGSITIDSDILEAVDILPNEKVAIVNNNNGARFETYVIAGERGSGKICLNGAASRLVEVGDVVIIMTYAQLNEEEIKNHAPKVAVMNEDNVIIEMIHEKENTIVL
2EEO Chain:B ((1-92))
-------------------------VTVDQDLLDAAGILPFEQVDIYDITNGARLTTYALPGERGSGVIGINGAAAHLVKPGDLVILVAYGVFDEEEARNLKPTVVLVDERNRILEV----------
General information:
TITO was launched using:
RESULT:
Template:
2EEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54563 for 576 contacts (-94.7/contact) +
2D Compatibility (PS) -10136 + (NN) -1847 + (LL) 3184
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -74812.0 ( -129.88 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_2EEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EEO-query.scw
PDB file :
Tito_Scwrl_2EEO.pdb
: