Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSVAIIGPGAVGTTIAYELQQS---------LPHTTLIGRHAKTITY---YTVPHAPAQDIVVKGYE--DVTNTFDVIIIAVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEHIP----FKNVCQAVVYI-SGQKKGDVVTHFRDYQLRI-----QDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEI-RILCRQLLLDGCRVAQAEGLN--FSEQTVDTIMTIYQGYPDEMGT---SMYYDIVHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM |
3HN2 Chain:A ((2-272)) | --RIAIVGAGALGLYYGALLQRSGEDVHFLLRRDYEAIAGNGLKVFSINGDFTLPH-------VKGYRAPEEIGPMDLVLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAGANAQGLATFIADGYVDDMLE----FTDAMGEYKPSMEIDREEGRPLEIAAI-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HN2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179349 for 1792 contacts (-100.1/contact) +
2D Compatibility (PS) -26221 + (NN) -4384 + (LL) 3640
1D Compatibility (HY) -18800 + (ID) 3350
Total energy: -228464.0 ( -127.49 by residue)
QMean score : 0.417
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