Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQASEQSNDTTQSSKNNASADSEKNNMIETPQLNTTANDTSDISANTNSANVDSTTKPMSTQTSNTTTTEPASTNETPQPTAIKNQATAAKMQDQTVPQEANSQVDNKTTNDANSIATNSELKNSQTLDLPQSSPQTISNAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDKVTASNFKLEKTTFDPNQSGNTFMAANFTVTDKVKSGDYFTAKL-----PDSLTGNGDVDYSNSNNTMPIADIKSTNGDVVAKATYDILTKTYTFVFTDYVNNKENINGQFSLPLFTDRAKAPKSGT-YDANINIADEMFNNKITYNYSSPIAGIDKPNGANISSQIIGVDTASGQNTYKQTVFVNPKQRVLGNTWVYIKGYQDKIEESSGKVSATD-TKLRIFEVNDTSKLSDSYYADPNDSNLKEVTDQFKNRIY----YE-----------HPNVASIKFGDITKTYVVLVEGHYDNTGKNLKTQVIQENVDPVTNRDYSIFGWNNENVVRYGGGSADGDSAVNPKDPTPGPPVDPEPSPDPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKVSKQHKTDALPETGDKSENTNATLFGAMMALLGSLLLFRKRKQDHKEKA |
| 1R19 Chain:A ((308-552)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLIYDVTFEVDDKVKS--TMTVNIDKNTVPSDLT-----------DSF-IPKIK---GEIIATGTYDNTNKQITYT-TDYVD---NIKAHLKLTSYIDKSKVPNNNTKLDVEYKTALSSVNKTITVEYQKP----NENRTANLQSMFTNIDTKN--HTVEQTIYINPLRYSAKETNVNISGNGDE-----GSTIIDDSTIIKVYKVGDNQNLPDS------------------NRIYDYSEYEDVTNDDYAQLG--NDVNINFGNIDSPYIIKVISKYD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1R19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71540 for 1330 contacts (-53.8/contact) +
2D Compatibility (PS) -22610 + (NN) -7274 + (LL) 2844
1D Compatibility (HY) -14800 + (ID) 3900
Total energy: -117280.0 ( -88.18 by residue)
QMean score : 0.509
|
|
|