Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELWPAIDLIGSTSVRLTEGKYDSEEKMSRSAEESIAYYSQFECVNRIHIVDLIGAKAQYAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYCIVGTKGIQDTDWLKEMAHTFPGRIYLSVDAY---GED-IKVNGWEEDTELNLFSFVRQLSDIPLGGIIYTDIAKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQRLASLN---VHAAIIGKAAHQASFWEGLE
3ZS4 Chain:A ((5-233))
---LLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGW--QRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQ-VELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGG-DLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRF-----
General information:
TITO was launched using:
RESULT:
Template:
3ZS4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97580 for 1908 contacts (-51.1/contact) +
2D Compatibility (PS) -24044 + (NN) -6863 + (LL) 1048
1D Compatibility (HY) -15600 + (ID) 3300
Total energy: -146339.0 ( -76.70 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3ZS4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZS4-query.scw
PDB file :
Tito_Scwrl_3ZS4.pdb
: