Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEITEGQRGDQAVNVQTV
1HZB Chain:A ((1-63))
MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANV---
General information:
TITO was launched using:
RESULT:
Template:
1HZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25307 for 409 contacts (-61.9/contact) +
2D Compatibility (PS) -6653 + (NN) -1225 + (LL) 364
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -41721.0 ( -102.01 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_1HZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HZB-query.scw
PDB file :
Tito_Scwrl_1HZB.pdb
: