Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEFLGFGVVGNFAGHLEQAGESHSFINMKSEEKDAPKGLFPFYIPYENCYLGRCCINNHKIILPSDPDLRVQAEPEIALECDVKYDEKHLVTKLVPNFFMAFNDASVRNLEATKLSQKKNFSPASKGIGQKLPI--DRFVYGGVCNNFSIASFLKYDNVWHIYGENS--KLLKYEFFYQKLLDWIKNQLNHQQDGDSLEALRPFLERHNFPTKMIFAIGATPYMPFAQEHFLQKGDEVVIVAYNHLQYSFEKIQNLLEEDALQTKEHANLSYVYQIVE
1UX4 Chain:A ((1661-1737))
------------------------------------------------------------------------------------------------------------RSVEIGNLSDSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFF-KKFADFI---------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 169 for 324 contacts (0.5/contact) +
2D Compatibility (PS) -7428 + (NN) -3118 + (LL) 13976
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -2701.0 ( -8.34 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_1UX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UX4-query.scw
PDB file :
Tito_Scwrl_1UX4.pdb
: