Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLNYDFLELVDDEPQRNTSLTSAIDKALADKKLARQNKPRVRVKDNLSLSETLDAYGRELSRLKNQQETIKASTIESSNLNSIVNKIKSGLPFGTISAFRPFKEAFIKDFTQDERELLVEAYKSGYKASQLDKVSKKWRDDPNPIDASYLADAFLREYRTIALKLSTALGKPFVNKFLNPKSETTMKDFMSSEKFVKKYRFTQKDNIKRTQELKSLLDQKRHFLGYLQVTGYWKDKLNDPLLPSKEVSFFVFQNEPSNSFNLKDQLLDLAKYFNQEAICYCQNAETGKVDLVLATEKDFGKVDMTFTGITFTIPLTQSITRLHNKVYTFFDKQGKDNYGVFFDELSTTKLKAMSIPKIADEFYRHLENRVKSFIRARQYHGSPRTFDADDIEKYELQAIKRLDLQRCAK---SKSFKASYNHNIKINNLANALRQ--GKEVSKTLITKVLANTIDTDAGYCFIS-DLATQLGNISPRLSKSIVTAIEQAEGIRLLYALIDKVSYNSLHNTLNFIFDIDNPMSDQSLNELVVEVPREALKNVKLPQIKNELTSQIFDGAYQFRGNDYQFKG |
1KP6 Chain:A ((1-79)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNAFCAGFGLSCKWECWCTAHGTGNELRYATAAGCGDHLSK--------SYYDARAGHCLFSDDLRNQFYSHCSSLNNNMSCRSLSK--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16937 for 483 contacts (-35.1/contact) +
2D Compatibility (PS) -7907 + (NN) -2374 + (LL) 33308
1D Compatibility (HY) -2000 + (ID) 900
Total energy: 3190.0 ( 6.60 by residue)
QMean score : 0.241
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