Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGKSSNDTQENPKDALKSTNFHEKHTKPTETTELVEENKALTTEKERLERENKNLTADKENLTKEKTELQKQVNELKNSKQVLENEKADWLREKENLTKDRENLTKEKTELTEKNKVLTTEKERLATEKENLTKEKTESQKQVNELKNSKQVLENEKADLTNENTKLKTDKTDLTEKNQRLTTEKTELNNKITGLATEKERLAADKENLTKESRQRKPN |
| 2YJF Chain:M ((4-117)) | -------------------------------------------------------------SLSERKNVLQLKLQQRRTREELVSQGIMPPLKSPAAFHEQRESLERARTEDYLKRKIRSRPERAELVRMHILEETSAEPSLQAKQLKLKRARL----ADDLNEKIAQRPERMELVEKNILPV------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 42287 for 487 contacts (86.8/contact) +
2D Compatibility (PS) -12026 + (NN) -4255 + (LL) 6316
1D Compatibility (HY) -1600 + (ID) 1300
Total energy: 29422.0 ( 60.41 by residue)
QMean score : 0.478
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