Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMTKNAYAFVVIEKSIMVFKCAKDKGLIPITEGFVPLKEGFLRSFKERCNLDFLENLDLLFLYDYQFPSEVFSLCKDLKNSIWDRKLVVVLVEALEGFKGLNLSLKIEDRHSNSLGNGVQKLLTNADLGSNHKPIVIDSMKTYHQSQQEKYKRERGETLEVRPTTPPSYGGGSIRISGDKKPDSNEENF |
4Q57 Chain:B ((129-198)) | ---------------------------------------------------------------DIQVSGQSEDMTAKEKLLLWSQRMV-------EGYQGLRC-----DNFTTSWRDG----LFNAII-HRHKPMLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q57.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3055 for 392 contacts (7.8/contact) +
2D Compatibility (PS) -7143 + (NN) -2443 + (LL) 7472
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -5059.0 ( -12.91 by residue)
QMean score : 0.321
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