Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEISEWLQKLDDALDKVVAKKEPESFLKPIISPIEDYQKSVRQIQAQFTDAPKFNEEGAYPQFLSCGLLQVRGKNGANMEFLLPKVYPFPPKSLYIEHEKDGQFLREMLMRLLSSAPLVQLEVILIDALSLGGIFNLARRLLDKNNDFIYQQRILTESKEIEEALKHLHEYLKVNLQEKLAGFRDFVHYNENAKDSLPLKALFLSGVDALSKDALYYLEKIMRFGSKNGVLSFVNLESEKNNQSAEDLKRYAEFFKDRTSFECLKYLNVEIISDQGIKSQHMQDFADKIKAYYKQ-KKEVKRELKDLQRDK--EFWTKSSQHEVSVPVGWDINHKEVCFKIGNEQNHTLICDHSGSGKSNFLHVLIQNLAFYYDPDEVQLFLLDYKEGVEFNAYVADPALEHARLVSVASSISYGITFLKWLCDEMQKRADRFKQFNVKDLSDYRKHEKMPRLIVVIDEFQVLFSDNKSTKAVEGHLNTLLKKGRSYGVHLVLATQTMRGTDINPSFKAQIANRIALPMDAEDSSSVLGDDAACEIQKPEGIFNNNGGNRKYHTKMSVPKAPDDFKSFLTKIHAEFNQRNLAPIDRKIYNGETPLKMPDTLKANEMRLHLGKKVDYEQKDLIVEFESNESHLLVVIQDLNARIALMKLLFQNVKSANKELVFCNKEKRLIRSFDAQKEYGITPVENILSVLDTAMNPNSALVIDNLNEAKELHDKVGAEKLKSFLEKAIDNEQYCVIFAHDFRQIKTNYHFDKLKELLNNHFKQCLAFRCNGENLNAIKSDLPPPSKLNVLLIELSKDSVTEFRPFSL |
4DFB Chain:A ((135-206)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSQNQAAKDLARFLS--------------ELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYEEGLNEIRSIK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14579 for 264 contacts (55.2/contact) +
2D Compatibility (PS) -7168 + (NN) -2592 + (LL) 44492
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: 44461.0 ( 168.41 by residue)
QMean score : 0.489
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