Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGLVLLYVGIVLISNGICGLTKVDPKSTAVMNFFVGGLSIVCNVVVITYSALHPTAPVEGAEDIVQVSHHLTSFYGPATGLLFGFTYLYAAINHTFGLDWRPYSWYSLFVAINTVPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWGVLWLTAFIENILKIPLGKFTPWLAIIEGILTAWIPAWLLFIQHWV |
2KI9 Chain:A ((10-23)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLAVLLICWFPVLALMAHSLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5164 for 53 contacts (-97.4/contact) +
2D Compatibility (PS) -1276 + (NN) 528 + (LL) 13004
1D Compatibility (HY) -2800 + (ID) 150
Total energy: 4142.0 ( 78.15 by residue)
QMean score : -0.200
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