Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL
4JWT Chain:A ((24-250))
--KIAIMGAMPEEISPILEKIG-SYKSTSYAGNKYYEATYQGVELVIAYSKIGKVFSALSAATMIEHFGATKLLFSGVAGAISTNLKVGDLIVATKLSQHDLDITAFGHPYGYVPEGSVFVEADKDMIELSKKVALEMGKSVQEGIIATGDQFVANEERKNWIGTTFGADALEMEGGSVGVVCNALNIPFFILRSISDAADMDASFSFDEFLESSAKESAEFIMKMVDEL
General information:
TITO was launched using:
RESULT:
Template:
4JWT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166801 for 2050 contacts (-81.4/contact) +
2D Compatibility (PS) -23468 + (NN) -1746 + (LL) 520
1D Compatibility (HY) -26000 + (ID) 5800
Total energy: -223295.0 ( -108.92 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_4JWT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JWT-query.scw
PDB file :
Tito_Scwrl_4JWT.pdb
: