Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFKKGVILDAKSVGLKALEVLKEVADFDFYEVTSPNQIVERSIEAE---IMVLNKVVITQEVLSQLPKLKLICITATGTDNVDIKSAKALGIEVKNVSAYSTESVAQHTLACALSLLGRINDYDRYCKSGEY-SQSDIFTHISDIKMGLIKGGQWGVIGLGNIGKRVAKLAQAFGAKVVYFSPKDK----KEEYER-LSLEELLKTSGIISIHAPLNESTRDLIALKELQSLKDGAILINVGRGGIVNEKDLALILETKDLY-YASDVFVKEPFEKDHAFLNPKIQNKLLLTPHIAWAYSDSLKTLVEKTKENIQDFLASQK |
| 2D0I Chain:A ((4-286)) | ----KVGVLLKMKR---EALEELKKYADVEIILYPSGEEL--KGVIGRFDGIIVSPTTKITREVLENAERLKVISCHSAGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIES--LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKL-EGKYLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELF---KYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177635 for 2086 contacts (-85.2/contact) +
2D Compatibility (PS) -29096 + (NN) -8147 + (LL) 972
1D Compatibility (HY) -26800 + (ID) 4900
Total energy: -245606.0 ( -117.74 by residue)
QMean score : 0.542
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