Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVNFFATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDYLELFEGHAEFNMVKDFCSRVYELSEFLDKK--LQVKYEDKGEPLKITWHSNCHALRVAKVIDSAKNLIRQLKNVELIELEKEEECCGFGGTFSVKEPEISAVMVKEKIKDIESRHVDVIVSADAGCLMNISTAMQKMGSLTKPMHFYDFLASRLGL |
4CYE Chain:A ((264-332)) | -----------------------------------------------------------------------------------------------ADFNQVQTI---QYSNSEDKDRKGMLQLKIAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFIIRP----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7363 for 385 contacts (-19.1/contact) +
2D Compatibility (PS) -6862 + (NN) 579 + (LL) 11608
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -5188.0 ( -13.48 by residue)
QMean score : 0.311
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