Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKRLRRLRSSENLRAMVRETRLNINDFIAPLFVIESDSGIKNEISSMPGVYQMSIEPLLKECEELVGLGIKAVLLFGIP--KHKDATGSHALNKDHIVAKATREIKKRFKDLIVIADLCFCEYTDHGHCGILEN-ASVSNDKTLKILNLQGLILAESGVDILAPSNMMDGNVLSLRKALDKAGYFHTPIMSYSTKFASSYYGPFRDVANSPPSF--GDRKSYQMDYANQKEALLESLEDEKQGADILMVKPALAYLDIVKEIRDHTLLPLALYNVSGEYAMLKLAQKHNLINYESVLLETMTCFKRAGADMIISYHAKEVANLLQRN |
1B4K Chain:A ((12-335)) | -YTRLRRNRRDDFSRRLVRENVLTVDDLILPVFVLDG-VNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGHTNVRIMAYSAKYASAYYGPFRDAVGSASNLGKGNKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKDEFRAPTFVYQVSGEYAMHMGAIQNGWLA-ESVILESLTAFKRAGADGILTYFAKQAAEQLRR- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1B4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -203619 for 2750 contacts (-74.0/contact) +
2D Compatibility (PS) -34913 + (NN) -17707 + (LL) 144
1D Compatibility (HY) -22800 + (ID) 7200
Total energy: -286095.0 ( -104.03 by residue)
QMean score : 0.616
|
|
|