Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEMELKLIKIDTSHYFEKKPGLGERMDYAGRCYYNKFQRVNAMLTSSLIQKHLKREIEIAHNLILRNDKVENIVFDYNGRNPERFYHKAQLLLREEGFMNFTAYNTKTPGHLHLYVHKGHTELGEGERLIKTLSMKLAQGLPKEWRVFPSNEWPKEFNILALPYEVFAKERGSSWAKHL |
2L3I Chain:A ((3-10)) | --------------------------------------------------------------------------------------------------------------------------------------------RCPKSWKCKAFKQRVLKRLLAMLRQHAF------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2L3I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1165 for 20 contacts (-58.2/contact) +
2D Compatibility (PS) -800 + (NN) -616 + (LL) 10744
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 6813.0 ( 340.65 by residue)
QMean score : 0.841
|
|
|