Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------MFDNTLINLFETAPLLTSLLAGILTFLSPCVLPLI--------PAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGFSLVFLGVGMSMAKLIHSFSFSWVNYIA-GGIVILFGLHFLGVFRFAFLYKTQSVGLAS---KSNSMQRFYPFLLGMSFALGWTPCIGPIFTSIVIMSASKDAYGLMLMVVFVMGLAIPFLLVALMLERAL-----LFL--------KSLRKYNRAIEIVSGLVLILMGILIMTNSLESLTNFLQN |
| 1P4N Chain:A ((1-335)) | PVLNLNDPQAVERYEEFMRQSPYGQVTQDLGWAKVKNNWEPVDVYLEDDQGAIIAAMSMLLGDTPTDKKFAYASKGPVMDVTDVDLLDRLVDEAVKALDGRAYVLRFDPEVAYSDEFNTTLQDHGYVTRNRNVADAGMHATIQPRLNMVLDLTKFPDAKTTLDLYPSKTKSKIKRPFRDGVEVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADTMRIFVAEREGKLLSTGIALKYGRKIWYMYAGSMDGNTYYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHVFVKDAPREYIGEIDKVLDPEVYAELVKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278360 for 1688 contacts (-164.9/contact) +
2D Compatibility (PS) -24763 + (NN) 2884 + (LL) 0
1D Compatibility (HY) 4400 + (ID) 1350
Total energy: -297189.0 ( -176.06 by residue)
QMean score : 0.147
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