Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTFQVPSITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVVEFDTPATQ-DLIKEALLDAGQEVV
3J09 Chain:A ((16-82))
MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVV
General information:
TITO was launched using:
RESULT:
Template:
3J09.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52080 for 438 contacts (-118.9/contact) +
2D Compatibility (PS) -6944 + (NN) -2093 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -67817.0 ( -154.83 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3J09.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J09-query.scw
PDB file :
Tito_Scwrl_3J09.pdb
: