Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVMVS----DKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRFWGSN----VIEIGDLTISPDEEKIIYKGREVEVKGKP--FEVLTHLARHRDQIVSKEQLLDAIWEEPEMVTPNVIEVAINQIRQKMDK-PLGISTVETVRRRGYRFCYPKPACEE
4KNY Chain:A ((6-226))
--VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQ-WSAVPVIVLSARSEESDKIAALDAGADDYLSKPF-GIGELQARLRVALRRH---APDPLVKFSDVTVDL-AARVIHRGEE-EVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRFML-------
General information:
TITO was launched using:
RESULT:
Template:
4KNY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97436 for 1507 contacts (-64.7/contact) +
2D Compatibility (PS) -22541 + (NN) -11486 + (LL) 488
1D Compatibility (HY) -17200 + (ID) 2750
Total energy: -150925.0 ( -100.15 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_4KNY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KNY-query.scw
PDB file :
Tito_Scwrl_4KNY.pdb
: