Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFKILATSFSLFLNSWLKRSKLSSVPFLSKRQISKSVQAIKIDANNKAIKYPPSVDNTVHNRMLSGSLNFNTENTNPKKNPTTTEKWIKF
2PQ4 Chain:B ((1-35))
--------------------MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQ------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2PQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6535 for 157 contacts (41.6/contact) +
2D Compatibility (PS) -3579 + (NN) -1459 + (LL) 3364
1D Compatibility (HY) -800 + (ID) 300
Total energy: 3761.0 ( 23.96 by residue)
QMean score : -0.013
(partial model without unconserved sides chains):
PDB file :
Tito_2PQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PQ4-query.scw
PDB file :
Tito_Scwrl_2PQ4.pdb
: