Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSNALSVGEIAHLINVSHSSVHNWIKTNLLEKLEIDHKIYVKTSSFLDFCRNHLGKNKLNRYANKSLKSAHNHQELILKYLEMLENSSDLENLGSYYEKELSNTTRNLEGIYYTPNRIVEQLFTLPKDFDTTQAIFCDPAVGSGNFVMHALKLGFKVENIYGYDTDAFAVALTKKRIKERYRLDCPNIMQ---KDFLSLKHAPQFDCIFTNPPWG--KKYNQNQKENFKQQFNLHQS-LDSASLFFMASLNCLKENAYLGLLLPESCLNIDAFSKMREMALKFQMRSLIDFDKPFKNLMTKAVGLALKKTHNKDQKISCFYQNSEFKRSPSSFFNNPKKIFNIHCSHQKNKILDHLFSLPHITLKNNAHFALGIVTGNNKEKLHPKQEKNTIPIFRGSDILKDRLKAPSQFINADLKDCQQVAPLSLYQAREKIVYKFISSKLVFFYDNKQRLFLNSANMFVLKENFPINAHALKELLNSDLMQFIFESLFKTHKILRKDLECLPLFAQFINNSFDEKFYLKNLGIEKKDPKHFTIRKNHACCLSFGFRG |
| 1AQI Chain:A ((77-211)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIV----KAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLLPKEGVRLDPSTLVQWLNSEAMQKHVRTLYRDFVPHLTLRMLERLPVRREYGFHT-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63519 for 765 contacts (-83.0/contact) +
2D Compatibility (PS) -12470 + (NN) -4975 + (LL) 13952
1D Compatibility (HY) -11200 + (ID) 1500
Total energy: -79712.0 ( -104.20 by residue)
QMean score : 0.392
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