Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLVKNTIYSFLLLSVLMAEDITSGLKQLDNTYQETNQQVLKNLDEIFSTTSPSANNKIGQEDALNIKKAAIALRGDLALLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQKTAEQQCGISDKVLVLYCEGKLKIEQEKQN-IRERLETSLKAYQSNIGGTASLITASQTLVESLKNKNFIKGIKKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK |
1MP1 Chain:A ((46-94)) | -----------------------------------------------------------------------------------------------------------------EVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQR------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5677 for 277 contacts (20.5/contact) +
2D Compatibility (PS) -4938 + (NN) -778 + (LL) 11528
1D Compatibility (HY) -4800 + (ID) 450
Total energy: 6239.0 ( 22.52 by residue)
QMean score : 0.329
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