Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIIYLILFLIVIYLLYRILDVLEQK
2KNC Chain:A ((981-989))
---------TILVLAMWK--------
General information:
TITO was launched using:
RESULT:
Template:
2KNC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3988 for 28 contacts (-142.4/contact) +
2D Compatibility (PS) -841 + (NN) -132 + (LL) 2184
1D Compatibility (HY) -1600 + (ID) 50
Total energy: -4427.0 ( -158.11 by residue)
QMean score : 1.016
(partial model without unconserved sides chains):
PDB file :
Tito_2KNC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KNC-query.scw
PDB file :
Tito_Scwrl_2KNC.pdb
: