Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQNIFSLLIQKKSYKKLETLLKLKKLKVFMPLSLQENLLFIFIKDSKLLFAFKDLWASKEFNQR-FAKEISHFLNTQGHACGLDELDALEILGYVPKDSLEKANFYAPIKKQAQFYRPSALGLFHNPIKDARLHECFEKARALIHYQRSFFEE
2E0G Chain:A ((33-66))
--------------------------------------------SDNTLALYAPNRFVLDWVRDKYLN-NINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVAQTQPQR----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2E0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4709 for 129 contacts (-36.5/contact) +
2D Compatibility (PS) -3617 + (NN) -1766 + (LL) 7096
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -5196.0 ( -40.28 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2E0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E0G-query.scw
PDB file :
Tito_Scwrl_2E0G.pdb
: