Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLNNKHREKGL---KAEEEACGFLKTLGFEMIERNFFS--QFGEIDIIALKKGVLHFIEVKSGENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
2JGU Chain:A ((123-211))
---------DKGLIPMEGEEE----LKILAFD-IETLYHEGEEFGKGPIIMISYADENEARVITWKNIDLPYVESVSTEKEMIKRFLRIIREKDP------DIIVTYNGDSFDFPYLAK
General information:
TITO was launched using:
RESULT:
Template:
2JGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3191 for 461 contacts (-6.9/contact) +
2D Compatibility (PS) -8986 + (NN) -1440 + (LL) 1240
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -17527.0 ( -38.02 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_2JGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JGU-query.scw
PDB file :
Tito_Scwrl_2JGU.pdb
: