Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPM---ETDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVESVIFDKGKPMLRMGEMILPIDSAIEFYKPDQKPLDQKLSDQKPQKLSEQKALEQKISEQKPQEPLDQKLSDQKPQKPLEQKISEQKPLDQKLSDQKPQKPLEQKISEQKPLDQKPQTPPKETA |
| 3TE9 Chain:A ((248-336)) | --------TIVMGASFRNVEQVIALAGCDALTISPVLLEELKNRDEHLEVKLT----------QISEADF----RWLMNE--NAMATHKLA-EGIRLFT---KDTIELENIIKQNL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26369 for 349 contacts (75.6/contact) +
2D Compatibility (PS) -8064 + (NN) 777 + (LL) 15876
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: 29308.0 ( 83.98 by residue)
QMean score : 0.239
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