Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHLAPLIHIPFKALWLGTALSMFLSLNLNAEENPTKTEPKPAKGVKNKPKSPVTNVMMTNCDNLKDFNAKQKEVLKAAYQFGSKENLGYEMAG------IAWKESCAGTYKIN---FSDPSAGIYHAYIPSVLK--SYGHNNSPFLRNVMGELLIKDDAFASEV----ALKELLYWKTRYHDNLKDMIKSYNKGSRWEKNEKANADAEKYYEEIQDRIRRLKESKIFDSQSSNDQELQKSANSNLDLDPIGNAMPQTLAQTETQKSQIEKSQIEEAQTQKSQEMKEAASEQAIKKPLEKEKDKPMYLAQINSADFAPAKKSPKKPAKASPKRSSKNNISVKSNTKTASKNKEVCKNCSPGQRNAILANHITLMQEL |
1LSG Chain:A ((9-117)) | --------------------------------------------------------------------------LAAAMKRHGLDNYR---GYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGS----------RNLCNIPCSALLSSDITASVNCAKKIVSDG-NGMNAWVAWRNRCKGTDVQAWIRGCRLQQHHLGGAKQAGDV--------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20192 for 711 contacts (-28.4/contact) +
2D Compatibility (PS) -9798 + (NN) -3161 + (LL) 13996
1D Compatibility (HY) 5600 + (ID) 650
Total energy: -14205.0 ( -19.98 by residue)
QMean score : 0.218
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