Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFQNENKLKVGASVKATI-NDKVVEAKVISIGFN--RVTLRSEKGQRSHLRFQ
2EQJ Chain:A ((11-51))
-----ACKFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLWK
General information:
TITO was launched using:
RESULT:
Template:
2EQJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8279 for 185 contacts (-44.8/contact) +
2D Compatibility (PS) -4129 + (NN) 1204 + (LL) 208
1D Compatibility (HY) -3200 + (ID) 300
Total energy: -14496.0 ( -78.36 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_2EQJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQJ-query.scw
PDB file :
Tito_Scwrl_2EQJ.pdb
: