Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNG---ITPELMAQMTSFIFEVVEKLGIKEKGYKLLTNVGKNAGQEVMHLHFHILSGDKH
3RHN Chain:A ((6-107))
-TIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLK-KGYRMVVNEGSDGGQSVYHVHLHVLGGRQM
General information:
TITO was launched using:
RESULT:
Template:
3RHN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79425 for 684 contacts (-116.1/contact) +
2D Compatibility (PS) -10749 + (NN) -4962 + (LL) 312
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -106374.0 ( -155.52 by residue)
QMean score : 0.749
(partial model without unconserved sides chains):
PDB file :
Tito_3RHN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RHN-query.scw
PDB file :
Tito_Scwrl_3RHN.pdb
: