Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHTLIERLEKVTNSKELEEARLNALGKKGVFADKFNQLKNLNGEEKNAFAKEIHHYKQAFEKAFELKKKAIMELELEERLKKEKIDVSLFNA-IKTSSSHPLNYTKNKIIEFFTPLGYKLEIGSLVEDDFHNFSALNLPPYHPARDMQDTFYF---------------KDHKLLRTHTSPVQIHTMQEQTPPIKMICLGETFRCDY-DLTHTPMFHQIEGLVVDQKGNIRFTHLKGVIEDFLHYFFG-GVKLRWRSSFFPFTEPSAEVDISCVFCKQEGCRVCSHTGWLEVLGCGMVNNAVFEAI-----------GYENVSGFAFGMGIERLAMLTCQINDLRSFFETDLRVLESF |
| 1JJC Chain:A ((85-346)) | -----------------------------------------------------------------------------------RVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPMQVRYMVAHTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGE--GIAMAHLKGAIYELAQALFGPDSKVRFQPVYFPFVEPGAQFAVWW----PEGGK------WLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLGVERLAMLRYGIPDIRYFFGGRLKFLEQF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159783 for 1825 contacts (-87.6/contact) +
2D Compatibility (PS) -23982 + (NN) -2362 + (LL) 7928
1D Compatibility (HY) -25600 + (ID) 5450
Total energy: -209249.0 ( -114.66 by residue)
QMean score : 0.405
|
|
|