Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYIIGVFDLRSTIIPLIDLAKWIGIVPDKSKENERIVIITEFNNVKMGFLVHSARRIRRISWKDVEPASFSASNSINKENITGTTRIENDKTLLILDLESILDDLKLNEDAKSTKEDTPKERFEGEVLFLDDSRTARKTLKNHLSKLGFS-ITEAVDGEDGLNKLEMLFKKYGDDLRKHLKFIISDVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVK-FDAEKFTEEISKILDKNA |
1D4Z Chain:A ((8-125)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQA--GGYG--------FVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENVIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52619 for 876 contacts (-60.1/contact) +
2D Compatibility (PS) -12383 + (NN) -5811 + (LL) 13864
1D Compatibility (HY) -10000 + (ID) 2300
Total energy: -69249.0 ( -79.05 by residue)
QMean score : 0.668
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