Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI-ECVEVLRCE---D----FESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDF--VQ-MTNNHWT-F-SIET-TRQCLNLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKV---AKLSKAELTPQIISERALNGDYPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVM-KKTPGLDGAGIALENYLLHDRI |
| 2QM1 Chain:A ((3-324)) | ---AMDKKIIGIDLGGTTIKFAILTTD-GVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNM-KKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGI-PFALDNDANVAALGERWKGAG----------ENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNG-F-------DCTCGKRGCLETVSSATGVVRVARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAE-KGDHFALMVVDRVCFYLGLATGNLGNTLNPD-SVVIGGGVSAAGEF-LRS-RVEKYFQEFTF-PQVRNSTKIKLAELGNEAGVIGAASLALQFSK---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184340 for 2577 contacts (-71.5/contact) +
2D Compatibility (PS) -31245 + (NN) -1903 + (LL) 2076
1D Compatibility (HY) -2400 + (ID) 2600
Total energy: -220412.0 ( -85.53 by residue)
QMean score : 0.318
|
|
|