Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFSVLTLFPQLILPYFEDSILKRALEKNLFELEVLNLRDFSANKYQKADHTLIGGGAGQILDPEMIENALHSVKNPKH----TIFLSAVGKPFKQIDAMRLAQKKHVVLVCGRYEGFDERSIELGADEVFCIGDFILTGGELGALCLIDSIARHIQGVLGNAQSLENESFENNYLETPNFANAVFKSKEINKIPAPLEYSKGNHAKIKQLKLDLSKLRTKFYRLDLFKQHKS
1UAK Chain:A ((21-245))
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVL---------SFADGLLDCPHYT----RPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLAL
General information:
TITO was launched using:
RESULT:
Template:
1UAK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123466 for 1524 contacts (-81.0/contact) +
2D Compatibility (PS) -22973 + (NN) -9256 + (LL) 676
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -175369.0 ( -115.07 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_1UAK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UAK-query.scw
PDB file :
Tito_Scwrl_1UAK.pdb
: