Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDLSYSLERVLQEDPAARNKWEVLLLYPGIHALLCYRLAHALHK--RRFYFIARALSQLARFITGIEIHPGAKIGRGLFIDHGMGVVIGETTEIGDDVTIYHGVTL--------GGTGKFKGKRHPTLGNRVVVGAGAKVLGAICVGDDVRIGANAVVLSDLPTGSTAVGAKAKTITKDR
3P47 Chain:A ((116-270))
--------------DPAAPGLSLIIRCYPGFQAVIVYRIAHVLYECGERYY--CREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQTVYI----------
General information:
TITO was launched using:
RESULT:
Template:
3P47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124608 for 1094 contacts (-113.9/contact) +
2D Compatibility (PS) -16015 + (NN) -10238 + (LL) 2640
1D Compatibility (HY) -15200 + (ID) 3550
Total energy: -166971.0 ( -152.62 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3P47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P47-query.scw
PDB file :
Tito_Scwrl_3P47.pdb
: