Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYTELKDKSIKELEELLHAKKAELFELRVKLKNMQLSNPNEIKKARRNIARINTAINAYYSSSVE
2ZJQ Chain:V ((1-55))
MKPSEMRNLQATDFAKEIDARKKELMELRFQAAAGQLAQPHRVRQLRREVAQLNTVKAELARKGEQ
General information:
TITO was launched using:
RESULT:
Template:
2ZJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10753 for 299 contacts (36.0/contact) +
2D Compatibility (PS) -6140 + (NN) -4965 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -4052.0 ( -13.55 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJQ-query.scw
PDB file :
Tito_Scwrl_2ZJQ.pdb
: