Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKKIFLLEDDYLLSESIKEFLEHLGYEVFCAFNGKEAHERLSVERFNLLLLDVQVPEMNSLELFKRIKNDFLISTPVIFITALQDNATLKNAFNLGASDYLKKPFDLDELEARIKRFFNDDPIEIMPNIFYHQHALNV--------KGKKEI-LAPKTAQLLEYFLEHKGQIISSQALENNLW-EQAIDDST-LRTYIKVLRKLLGKNCIE-----THKGVGYRFNPL
4KNY Chain:A ((6-225))
----VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQ--WSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRH----APDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRFML-
General information:
TITO was launched using:
RESULT:
Template:
4KNY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137439 for 1416 contacts (-97.1/contact) +
2D Compatibility (PS) -21854 + (NN) -13307 + (LL) 804
1D Compatibility (HY) -14800 + (ID) 2850
Total energy: -189446.0 ( -133.79 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_4KNY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KNY-query.scw
PDB file :
Tito_Scwrl_4KNY.pdb
: