Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLETTIDFSRYSSVKIGAPLKVSVLENDNEISQEHQIIGLANNLLIAPDVKNLALLG--KNYDYICDKGEW-VEVGGAANASKIFNYFRANDLEGLEFLGQLPGTLGALVKMNAGMKEFEIKNV------LESACVNGEWLEKEALGLDYRSSGFN----------GVVLR--------------ARFKKTHGFREGVLKACKSMRKSHPKLP------NFGSCFKNP-----------------PND---------YAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAKTRVLQEYGIHLEEEVKILR |
2MBR Chain:A ((43-327)) | ------------------------------------ILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTT--KLPDPKVNGNAGSFFKNPVVSAETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2MBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110764 for 1612 contacts (-68.7/contact) +
2D Compatibility (PS) -22690 + (NN) 2438 + (LL) 2464
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -145852.0 ( -90.48 by residue)
QMean score : 0.382
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