Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNQVKKILGMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGAPDWVVGDLEKVAKYEKYSGVFLGRAEDLITNNDVDYSTNQATAKARANLAANLKSTLQKDLENEKTRTVDASGKRS-ISGTDTEKISQLVDKELIASKMLARYVGKDRVFVLVGLDKQIVDKVREELGMVKK |
1E06 Chain:A ((79-153)) | ----------------------------------------------------------------------------DVNYAGNNKFVVSYASETALIISNINVDEEGDKTIMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNIIERDDCPA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19997 for 422 contacts (47.4/contact) +
2D Compatibility (PS) -7044 + (NN) 5731 + (LL) 6916
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 22650.0 ( 53.67 by residue)
QMean score : 0.101
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