Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSGASLYLRPFVIGVGDNLGV-KPASEYLFIVFCAPVGAYFKGGIEKGGARFITTAFDRAAPKGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPTTHTKIEEVGAANFFGI-THDDAFITPHSPS----ILPSVTRKSLMVLAKEHLKLKVEEREILIDEL------GAFKEAGACGTAAIITPIKEIAHNNKSY---SFEAPGNITKQLYDLLLSIQQGEQEAPKDWIFEVG |
| 5BWR Chain:A ((32-369)) | -----------LVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWV-PDAAGTSLYVRPVLIGNEPSLGVSQPTRALLFVILC-PVG-------VTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDH-QLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELILRFQKELKEIQYGIRA--HEWMFPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141064 for 2520 contacts (-56.0/contact) +
2D Compatibility (PS) -33971 + (NN) -10290 + (LL) 892
1D Compatibility (HY) -28000 + (ID) 5100
Total energy: -217533.0 ( -86.32 by residue)
QMean score : 0.494
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