Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDRKLLLQDFDKVALSLKKRNHAMDDELERLREAIAHYKKQL---IELEGLQAFQNKVSKEFGIKMAQKMDTSDLKKELENNKIKLNELSKSVGEAEQEMDLKLSIIPNLVDEKTPLGASEEDNIEIKKILTPRNFTFKPKE------------HFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKI---ENENLYLIPTAEVTLTNLYNDTIIS--VENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQEHMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQ---LVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL |
| 3QO5 Chain:A ((14-435)) | ---------DPEIIKASQKKRG----DSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRF-------DLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESV-VDSQDEENNELVRTWTPENYK-KPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGYFLRNYGVFLNQALINYGLLFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDGEDEK-YLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAG-----AWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGI-----EKKYVHCLNSTLSATERTICCILENYQKEDGLV-IPEVLRKYI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98839 for 3044 contacts (-32.5/contact) +
2D Compatibility (PS) -41462 + (NN) -25061 + (LL) 2240
1D Compatibility (HY) -25600 + (ID) 6400
Total energy: -195122.0 ( -64.10 by residue)
QMean score : 0.451
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